The de novo reference genome and transcriptome assemblies of the wild tomato species Solanum chilense

R. Stam*, T. Nosenko, A.C. Hörger, W. Stephan, M. Seidel, Jose M.M. Kuhn, G HabererA Tellier (2019) BioRxiv

Peer reviewed Publications

The current epidemic of the barley pathogen Ramularia collo-cygni derives from a recent population expansion and shows global admixture

R. Stam*, H. SghyerA. TellierM. Heß, R. Hückelhoven, (2019) Phytopathology (early view)

Subsets of NLR genes show differential signatures of adaptation during colonisation of new habitats

R. Stam*, G.A. Silva-Arias, A Tellier (2019) New Phytologist 224 (1): 367-379

A new reference genome shows the one-speed genome structure of the barely pathogen Ramularia collo-cygni

R, Stam*, M. Münsterkötter, S.D. Pophaly SD, L. Fokkens, H. Sghyer, U. Güldener, R. Hückelhoven, M. Hess (2018) . Genome Biology and Evolution 10(12) 3243-3249

Good Riddance? Breaking Disease Susceptibility in the Era of New Breeding Technologies

S. Engelhardt, R. Stam, R. Hückelhoven (2018) Agronomy 8(7), 114

When resistance gene pyramids are not durable—the role of pathogen diversity

R. Stam*, B. McdDonald (2018) Molecular Plant Pathology 19(3) 521-524

An NMRA-like protein regulates gene expression in Phytophthora capsici to drive the infection cycle on tomato

J. Pham, R. Stam, M. Csukai, E. Huitema (2018) Molecular Plant Microbe Interactions 31(6) 665-677

Diversification of defensins and NLRs in Arabidopsis species by different evolutionary mechanisms

M. Mondragón-Palomino, R. Stam, A. John-Arputharaj and T. Dresselhaus (2017) BMC Evolutionary Biology 17:255

Quantitative analysis of the tomato nuclear proteome during Phytophthora capsici infection unveils regulators of immunity

A.J. M. Howden, R. Stam , V.M. Heredia, … , and E. Huitema (2017) New Phytologist 215 (1) 309-322
doi: 10.1111/nph.14540

The wild tomato species Solanum chilense shows variation in pathogen resistance between geographically distinct populations

R. Stam*, D. Scheikl, A. Tellier (2017) PeerJ 5, e2910

Pooled Enrichment Sequencing Identifies Diversity and Evolutionary Pressures at NLR Resistance Genes within a Wild Tomato Population.

R. Stam*, D. Scheikl, A. Tellier (2016) Genome biology and evolution 8 (5), 1501-1515

The Top 10 oomycete pathogens in molecular plant pathology

S. Kamoun, O. Furzer, …, R. Stam, et al. (2015) Molecular Plant Pathology 16 (4), 413-434.

The role of effectors in nonhost resistance to filamentous plant pathogens.

R. Stam*, S. Mantelin, H. McLellan and G. Thilliez (2014) Frontiers in Plant Science 5:582

Effector specialization following a host jump in the Irish potato famine pathogen lineage

S. Dong, R. Stam, L.M. Cano,…, and S. Kamoun, (2014) Science 343 (6170) 552-555

Mp10 and Mp42 from the aphid species Myzus persicae trigger plant defenses in Nicotiana benthamiana through different activities

P.A. Rodriguez, R. Stam, T. Warbroek and J.I.B. Bos (2014) Molecular Plant-Microbe Interactions 27 (1) 30-39

Characterisation of cell death inducing Phytophthora capsici CRN effectors suggests diverse activities in the host nucleus

R. Stam, A.J.M. Howden, M. Delgado-Cerezo, T.M.M.M Amaro, G.B Motion, J. Pham and E. Huitema (2013) Frontiers in Plant-Microbe interactions 4 -387
DOI: 10.3389/fpls.2013.00387

Phytophthora capsici-tomato interaction features dramatic shifts in gene expression associated with a hemi-biotrophic lifestyle

J. Jupe, R. Stam, A.J.M. Howden, J.A.Morris, R. Zhang, P. Hedley and E. Huitema (2013) Genome Biology 14(6):R63

Identification and characterisation of CRN effectors in Phytophthora capsici shows modularity and functional diversity

R. Stam, J. Jupe, A.J.M. Howden, J.A. Morris, P.C. Boevink, P. Hedley and E. Huitema (2013) PLOS ONE 8(3) e59517
DOI: 10.1371/journal.pone.0059517

Sequencing and Mapping Reveal Loss of Heterozygosity as a Mechanism for Rapid Adaptation in the Vegetable Pathogen Phytophthora capsici

K.H. Lamour, J. Mudge, …, R. Stam, et al. (2012) Molecular Plant Microbe Interactions 25 (10) 1350-1360

The oomycete broad-host-range pathogen Phytophthora capsici

K. H. Lamour, R. Stam, J. Jupe, and E. Huitema. (2012) Molecular Plant Pathology 13 (4) 329-337

Recent developments in effector biology of filamentous plant pathogens

R Oliva, J. Win, S. Raffaelle …, R Stam, et al. (2010) Cellular Microbiology 12(6) 705-715
DOI: 10.1111/j.1462-5822.2010.01471.x